CDS

Accession Number TCMCG017C03987
gbkey CDS
Protein Id OMP09435.1
Location join(33740..35786,35977..36793,37542..37832,38091..38304)
GeneID InterPro:IPR000014
Organism Corchorus olitorius
locus_tag COLO4_05474

Protein

Length 1122aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012362.1
Definition hypothetical protein COLO4_05474 [Corchorus olitorius]
Locus_tag COLO4_05474

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCAAGACCAAGCCATTCATCTAGCAACTCTGGGAGATCAAGGCACAGTGCCAGGATTATTGCTCAAACGACTGTAGATGCAAAACTCCATGCAGATTTTGAGGAGTCTGGTAGCTCTTTTGACTATTCAAGTTCAGTGCGTGTAAGTGGAGACCAGCAGCCCAGGTCAGACAAGGTTACCACAGCTTATCTCCACCAAATTCAGAAAGGCAAGTTCATCCAACCCTTCGGGTGTTTGCTAGCCTTGGATGAGAAAACTTACAAAGTCATAGCATACAGTGAGAATGCCCCTGAAATGTTGACCATGGTTAGCCATGCTGTACCGAGTGTTGGAGACCACCCAGTTCTTGGCATTGGAACCGATATAAAAACTATTTTCACTGCCCCCAGTTCCTCTGCATTGCTAAAGGCCCTAGGAATTGGGGAGGTTTCTCTTTTAAATCCAATCTTGGTCCACTGCAAGACTTCTGGGAAGCCCTTTTATGCAATAATCCATCGGGTTACGGGAAGCTTGATTATTGATTTTGAACCTGTGAAGCCTTATGAAGTCCCCATGACTGCTGCTGGAGCCTTGCAGTCATACAAGCTAGCAGCAAAGGCAATTACTCGCTTACAGTCTCTGCCTAGTGGGAGCATGGAAAGACTTTGTGATACAATGGTGCAGGAGGTTTTTGAACTCACTGGTTATGACAGGGTGATGGCTTATAAATTTCATGATGATGACCATGGGGAAGTGGTTTCTGAGATAACAAAGCCAGGCCTAGAGCCTTACTTAGGTTTGCATTACCCAGCCACCGATATCCCTCAGGCTGCTCGATTTTTGTTTATGAAGAACAAAGTTCGCATGATTGTTGATTGCCGGGCAAAACATGTAAAAGTATTTCAAGACGATAAGCTTCCTTTTGACCTTACCTTGTGTGGCTCAACCCTAAGGGCCCCGCACAGCTGCCATTTACAGTATATGGAGAACATGAATTCCATTGCTTCTCTGGTTATGGCTGTTATTGTCAATGATGGAGACGAAGAGGGTGACAGCCCTGATTCAGCACAGCCTCAACAAAAGAGAAAGAGACTGTGGGGTTTGGTAGTATGCCATAACACCACTCCTAGGTTTGTTCCGTTCCCCCTCAGGTATGCCTGCGAGTTTCTGGCTCAAGTGTTTGCTATCCATGTGAATAAGGAGTTAGAGTTGGAAAATCAAATTATTGAAAAGAATATCCTGCGTACTCAGACCCTATTGTGTGATATGCTTATGCGGGATGCCCCTGTGGGCATTGTATCGCAGAGCCCAAATATAATGGATTTGGTGAAATGTGATGGAGCTGCCTTATTATACAAAATGAAAATATGGAAACTAGGAGTAACTCCAAGTGACTTTCAATTGCATGAGATAGCAGCATGGCTTTCTGAATGTCATATGGATTCCACTGGTTTGAGTACTGATAGCTTGAATGATGCTGGGTTTCCAGGGGCTTTGGCTCTTGGTGATGTAGCATGTGGAATGGCTGCTGTGAGGATAACCCCCAAGGACATGCTTTTCTGGTTCCGGTCTCATACTGCTGCAGAAATTCGATGGGGTGGTGCAAAGCATGAACCTGGTGAGAAGGATGATGGTAGAAAGATGCATCCAAGGTCATCATTCAAGGCTTTCCTTGAAGTTGTGAAGACAAGAAGTTTGCCATGGAAGGACTATGAAATGGATGCAATCCATTCCTTGCAGCTTATTCTAAGGAATGCATTCAAAGATATTGATACTTCAGATACAAACACTAGTGCCATACATTCGAAGCTCAGTGACCTCAAAATAGAAGGGATGCAAGAACTGGAGGCAGTGACGAGTGAGATGGTTCGTTTGATTGAAACAGCTACAGTGCCAATTTTGGCAGTTGACATCGATGGCTTAATTAATGGGTGGAATTTGAAAATTGCTGAGTTGACTGGTCTTCCTCTTGATAAAGCAATTGGAAAGCATTTACTCACAATTGTAGAAGATTCTTCAGTCGAAACAGTCAAGAAGATGTTATTCTTGGCATTGCAGGGCAAAGAGGAGAAGAACATCCAATTTGAGATCAAAACTCATGGGCCAAGGACCGAGGCTGGCCCCATCAGTTTAATTGTCAATGCTTGCGCAAACAGGGATCTCCATGAAAATGTTGTGGGGGTTTGTTTTGTGGCACAAGATATAACTGGTCAGAAGATAGTCATGGACAAATTCACCCGGATTGAAGGTGATTACAAAGCTATTGTACAAAATCCAAACCCACTCATTCCGCCCATATTTGGTATGGATGAATTTGGCTGGTGCTCTGAGTGGAATCCAGCAATGACAAAGTTAACTGGGTGGAAGAGAGACGAAGTGGTGGACAAAATGCTGTTGGGGGAGGTTTTTGGTACCCACATCGCATGCTGTCGTCTCAAGAATCAAGAATCTTTTGTCAATCTTGGCGTTGTACTTAATAATGCCGTGACTGGCCATGAGCCTGAGAAGGTTCCTTTTGGTTTCTTTGCACGTAGTGGAAAGTATGTGGAATGCTTGTTATGTGTGAATAAAAAATTGGACAGAGAGGGTGCTGTCACTGGTGTCTTCTGTTTCTTGCAGCTTGCAAGCCATGAGCTGCAACAAGCACTTCATGTTCAGCGATTATCAGAGCAAACTGCCATGAAGAGATTGAAAGCATTAGCTTATCTGAAAAGGCAAATCCATAATCCTCTCTCTGGGATTATCTTCTCTAGGAAAATGATGGAGGGCACAGAGTTGGGACCAGAACAAAAACGCCTTCTGCAGACTAGTACTCTGTGCCAGCACCAGCTCAGCAAGATACTTGATGATTCAGATCTCGATAGCATCATTGACGGCTACTTGGATCTTGAAATGATTGAATTCACCCTGAATGAGGTATTGGTTGCTTCTATTAGTCAAGTCGTGATGAAAAGCACTGGGAAGGGTATCCGAATAGTAAACGACACAGCAGAAGAGGTCATGACTGAGACCTTATATGGAGATAGTGTTAGACTTCAACAGGTCTTAGCTGATTTCTTGTCGGTATCAGTTAATTTTACACCAAATGGAGGCCAGCTTGTTCTTTTAGCAAGCTTAACAAAAGATCAACTAGGACAGTCTGTTCATCTTGCCCATTTGGAACTCAGGATAACACATGCAGGTGGTGGAGTACCTGAACCATTGCTGAACCAAATGTTTGGAAATGATGGAGATGCATCAGAGGAGGGTATCAGTTTGTTCATCAGCCGAAAGTTGGTAAAACTCATGAATGGGGACATCCAGTACTTAAGGGAAGCAGGCAGGTCAACTTTCATCTTGACTGTTGAACTTGCTGCAGCAAATAGGCCTAAACCTAACTGA
Protein:  
MSSSRPSHSSSNSGRSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVSGDQQPRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIKTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVFQDDKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDSPDSAQPQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPVGIVSQSPNIMDLVKCDGAALLYKMKIWKLGVTPSDFQLHEIAAWLSECHMDSTGLSTDSLNDAGFPGALALGDVACGMAAVRITPKDMLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIDTSDTNTSAIHSKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDIDGLINGWNLKIAELTGLPLDKAIGKHLLTIVEDSSVETVKKMLFLALQGKEEKNIQFEIKTHGPRTEAGPISLIVNACANRDLHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGMDEFGWCSEWNPAMTKLTGWKRDEVVDKMLLGEVFGTHIACCRLKNQESFVNLGVVLNNAVTGHEPEKVPFGFFARSGKYVECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTAMKRLKALAYLKRQIHNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQHQLSKILDDSDLDSIIDGYLDLEMIEFTLNEVLVASISQVVMKSTGKGIRIVNDTAEEVMTETLYGDSVRLQQVLADFLSVSVNFTPNGGQLVLLASLTKDQLGQSVHLAHLELRITHAGGGVPEPLLNQMFGNDGDASEEGISLFISRKLVKLMNGDIQYLREAGRSTFILTVELAAANRPKPN